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  5. Pnu_g07782

Pnu_g07782


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07782

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00020440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
AMTR_s00142p00045170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Aspi01Gene67255.t1 Aspi01Gene67255 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09634 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00683 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33387 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g52090.1 LOC_Os01g52090 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 121 209
No external refs found!