Pnu_g07586 (HEN2)

Aliases : HEN2

Description : not classified & original description: none

Gene families : OG0000709 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g07586

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00200390	HEN2,...	RNA processing.RNA decay.exosome complex.associated...	0.02	OrthoFinder output from all 47 species
Ala_g07801	HEN2	RNA helicase component *(HEN2) of Nuclear Exosome...	0.04	OrthoFinder output from all 47 species
Aob_g06073	HEN2	RNA helicase component *(HEN2) of Nuclear Exosome...	0.03	OrthoFinder output from all 47 species
Cba_g07746	No alias	RNA helicase component *(MTR4) of TRAMP nucleolar...	0.02	OrthoFinder output from all 47 species
Ceric.17G002800.1	Ceric.17G002800	RNA helicase component *(MTR4) of TRAMP nucleolar...	0.03	OrthoFinder output from all 47 species
Cre02.g117900	No alias	RNA processing.RNA decay.exosome complex.associated...	0.01	OrthoFinder output from all 47 species
Dde_g30301	HEN2	RNA helicase component *(HEN2) of Nuclear Exosome...	0.05	OrthoFinder output from all 47 species
Dde_g31250	No alias	RNA helicase component *(SKI2) of SUPERKILLER regulation...	0.03	OrthoFinder output from all 47 species
LOC_Os11g07500.1	HEN2, LOC_Os11g07500	RNA helicase component MTR4/HEN2 of Nuclear Exosome...	0.02	OrthoFinder output from all 47 species
Len_g22463	No alias	RNA helicase component *(MTR4) of TRAMP nucleolar...	0.04	OrthoFinder output from all 47 species
Lfl_g02277	No alias	RNA helicase component *(MTR4) of TRAMP nucleolar...	0.03	OrthoFinder output from all 47 species
Msp_g19222	No alias	RNA helicase component *(MTR4) of TRAMP nucleolar...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004055	argininosuccinate synthase activity	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006525	arginine metabolic process	IEP	HCCA
BP	GO:0006526	arginine biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	90	236

External Links

No external refs found!