Pnu_g07524 (GTB1)

Aliases : GTB1

Description : component *(SPT6) of SPT6-IWS1 transcription elongation complex & original description: none

Gene families : OG0001807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001807_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g07524

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00001486.8	GTB1	Chromatin organisation.histone chaperone...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0238.g026586	GTB1	component *(SPT6) of SPT6-IWS1 transcription elongation...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR028231	Spt6_YqgF	742	892
IPR028083	Spt6_acidic_N_dom	26	118
IPR032706	Spt6_HHH	901	1003
IPR028088	Spt6_HTH_DNA-bd_dom	315	432
IPR041692	HHH_9	1017	1109
IPR035420	Spt6_SH2	1233	1440

External Links

No external refs found!