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  5. Pnu_g07273

Pnu_g07273 (EBF2)


Aliases : EBF2

Description : substrate(EIN3) adaptor of SCF E3 ubiquitin ligase *(EBF) & original description: none


Gene families : OG0001670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07273
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00046140 FBL6, EBF1,... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Azfi_s0042.g026849 FBL6, EBF1 not classified & original description: CDS=154-783 0.04 OrthoFinder output from all 47 species
Ceric.02G042500.1 FBL6, EBF1,... substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dcu_g10709 EBF2 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os02g10700.1 EBF2, LOC_Os02g10700 EBF-type ethylene signal transducer. component EBF of... 0.03 OrthoFinder output from all 47 species
Pnu_g13899 FBL6, EBF1 substrate(EIN3) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 637 659
IPR001611 Leu-rich_rpt 716 738
IPR001611 Leu-rich_rpt 374 397
IPR001810 F-box_dom 192 223
No external refs found!