Gb_15820


Description : no hits & (original description: none)


Gene families : OG_01_0000364 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000364_tree ,
OG_02_0000134 (LandPlants) Phylogenetic Tree(s): OG_02_0000134_tree ,
OG_03_0000108 (SeedPlants) Phylogenetic Tree(s): OG_03_0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15820
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_06034 No alias no hits & (original description: none) 0.15 Archaeplastida
Gb_06978 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_08666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_09514 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 Archaeplastida
Gb_13443 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_16475 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_16799 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_22414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_26269 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_27233 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_28622 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 Archaeplastida
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_29919 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_33414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_39185 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_39221 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_03181 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_06034 No alias no hits & (original description: none) 0.15 LandPlants
Gb_06223 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_06978 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_08666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_09514 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 LandPlants
Gb_10322 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_13443 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_13701 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_16475 No alias no hits & (original description: none) 0.08 LandPlants
Gb_16799 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_21518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_22414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_26269 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 LandPlants
Gb_27233 No alias no hits & (original description: none) 0.07 LandPlants
Gb_28622 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 LandPlants
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_29919 No alias no hits & (original description: none) 0.05 LandPlants
Gb_33414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_37914 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 LandPlants
Gb_38048 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_39185 No alias no hits & (original description: none) 0.05 LandPlants
Gb_39221 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Pp3c2_13220V3.1 No alias No annotation 0.01 LandPlants
Gb_01729 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_03181 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_06034 No alias no hits & (original description: none) 0.15 SeedPlants
Gb_06223 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_06978 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_08666 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_09514 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 SeedPlants
Gb_10322 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_13443 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_13701 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_16475 No alias no hits & (original description: none) 0.08 SeedPlants
Gb_16799 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_18335 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_21518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_22414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_26269 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_27233 No alias no hits & (original description: none) 0.07 SeedPlants
Gb_28622 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 SeedPlants
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_29919 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_33414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_37914 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 SeedPlants
Gb_38048 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_39185 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_39221 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 355 406
No external refs found!