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  5. Pnu_g07196

Pnu_g07196


Description : not classified & original description: none


Gene families : OG0003957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07196
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00027180 evm_27.TU.AmTr_v1... Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g026027 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g05402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07216 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g01256 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s2756.g112948 No alias not classified & original description: CDS=218-898 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000525.2 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g21558 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g03038 No alias RNA chaperone component *(U11/U12-31K) of U11/U12 snRNP... 0.08 OrthoFinder output from all 47 species
Dde_g17732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020748001 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_36817 No alias Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_36818 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g53020.1 LOC_Os01g53020 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g10921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_213630g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g47418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13780 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g28209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00796 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g15245 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc07g055260.3.1 Solyc07g055260 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g05014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09722 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 158 220
No external refs found!