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  5. Pnu_g07012

Pnu_g07012


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07012
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00085040 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.regulation of key... 0.04 OrthoFinder output from all 47 species
Ceric.19G006500.1 Ceric.19G006500 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G006600.1 Ceric.19G006600 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01017151001 No alias Secondary metabolism.phenolics.regulation of key... 0.04 OrthoFinder output from all 47 species
GSVIVT01017545001 No alias Secondary metabolism.phenolics.regulation of key... 0.03 OrthoFinder output from all 47 species
Gb_35244 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.03 OrthoFinder output from all 47 species
MA_4376480g0010 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species
MA_4797933g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7572g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_78508g0010 No alias F-box/kelch-repeat protein At1g80440 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Smo65366 No alias Secondary metabolism.phenolics.regulation of key... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 15 51
IPR006652 Kelch_1 111 153
IPR006652 Kelch_1 157 202
No external refs found!