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  5. Pnu_g06841

Pnu_g06841


Description : RNA polymerase nuclear import factor *(RIMA) & original description: none


Gene families : OG0005503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06841

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00194360 evm_27.TU.AmTr_v1... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
Aev_g01448 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species
Len_g09791 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g17423 No alias RNA polymerase nuclear import factor *(RIMA) & original... 0.03 OrthoFinder output from all 47 species
MA_6521877g0010 No alias RIMA RNA polymerase nuclear import factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
InterPro domains Description Start Stop
IPR007308 Rtr1/RPAP2_dom 35 107
No external refs found!