AMTR_s00039p00083280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.46

Description : Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate isomerase.large subunit


Gene families : OG_01_0003192 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003192_tree ,
OG_02_0005018 (LandPlants) Phylogenetic Tree(s): OG_02_0005018_tree ,
OG_03_0005508 (SeedPlants) Phylogenetic Tree(s): OG_03_0005508_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00083280
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021098.7 No alias Secondary metabolism.nitrogen-containing secondary... 0.02 Archaeplastida
LOC_Os02g03260.1 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.03 Archaeplastida
MA_10427782g0010 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.03 Archaeplastida
MA_10430943g0010 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.04 Archaeplastida
MA_826924g0010 No alias 3-isopropylmalate dehydratase large subunit,... 0.03 Archaeplastida
Smo439578 No alias Secondary metabolism.nitrogen-containing secondary... 0.02 Archaeplastida
LOC_Os02g03260.1 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.02 LandPlants
MA_10427782g0010 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.02 LandPlants
MA_10430943g0010 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.02 LandPlants
LOC_Os02g03260.1 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.02 SeedPlants
MA_10427782g0010 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.02 SeedPlants
MA_10430943g0010 No alias large subunit of isopropylmalate isomerase heterodimer.... 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 366 503
IPR001030 Acoase/IPM_deHydtase_lsu_aba 72 361
No external refs found!