Gb_15338


Description : C2H2 zinc finger transcription factor


Gene families : OG_01_0000055 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000055_tree ,
OG_02_0000021 (LandPlants) Phylogenetic Tree(s): OG_02_0000021_tree ,
OG_03_0000307 (SeedPlants) Phylogenetic Tree(s): OG_03_0000307_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15338
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.07 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.02 LandPlants
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AT1G24625 ZFP7 zinc finger protein 7 0.03 LandPlants
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Solyc04g014540.3.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 SeedPlants
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!