Pnu_g06780


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06780

Target Alias Description ECC score Gene Family Method Actions
Adi_g011762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g103176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g07878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20353.t1 Aspi01Gene20353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30003.t1 Aspi01Gene30003 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47030.t1 Aspi01Gene47030 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043090 No alias not classified & original description: CDS=327-2291 0.04 OrthoFinder output from all 47 species
Cba_g16241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G046200.1 Ceric.28G046200 not classified & original description: pacid=50570096... 0.06 OrthoFinder output from all 47 species
Dac_g29053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12108 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g30300.1 LOC_Os02g30300 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g23440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436160g0020 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_219531g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_6399g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g00906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009923 No alias not classified & original description: CDS=105-1622 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013455 No alias not classified & original description: CDS=833-2278 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.03 OrthoFinder output from all 47 species
Sam_g36277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo171141 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e028443_P002 Zm00001e028443 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006597 Sel1-like 236 265
IPR006597 Sel1-like 198 234
IPR002893 Znf_MYND 387 428
No external refs found!