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  5. Pnu_g06765

Pnu_g06765


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06765
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00227430 AT-TCP20, TCP20,... Multi-process regulation.circadian clock.morning element... 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00035550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
AT5G51910 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
Adi_g040816 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088074 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22689 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46523 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.02 OrthoFinder output from all 47 species
Aop_g14354 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43392.t1 Aspi01Gene43392 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02339 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07622 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Msp_g35770 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25970 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013125 AtTCP14, TCP14 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc06g070900.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e015209_P001 Zm00001e015209 transcription factor (TCP). CHE circadian clock repression factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 214 318
No external refs found!