Pnu_g06205 (At-SCL30A, SCL30A)

Aliases : At-SCL30A, SCL30A

Description : RNA splicing factor *(SCL28/30/33) & original description: none

Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g06205

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre13.g586916	At-SCL28, SCL28	RNA processing.RNA splicing.spliceosome-associated...	0.03	OrthoFinder output from all 47 species
Tin_g16298	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008184	glycogen phosphorylase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	40	110

External Links

No external refs found!