MA_45587g0020


Description : 10.7 cell wall.modification Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell. expansin A7 (EXPA7)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_45587g0020
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 Gene family
AT1G26770 ATEXPA10,... expansin A10 0.02 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.04 Gene family
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.02 Gene family
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.02 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 Gene family
AT5G39260 EXPA21, EXP21,... expansin A21 0.02 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01014362001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
LOC_Os02g16730 Os02g0267200 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16800 Os02g0267900 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06010 Os03g0155500 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06020 Os03g0155700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os05g19600 Os05g0277000 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_134413g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc05g052245.1.1 Solyc05g052245.1 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc12g089380.2.1 Solyc12g089380.2 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d027717 GRMZM2G173826 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032883 GRMZM2G332412 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032884 GRMZM2G035189 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 184 262
IPR009009 RlpA-like_DPBB 87 173
No external refs found!