Cpa|evm.model.tig00001130.31


Description : 25.1 C1-metabolism.glycine hydroxymethyltransferase Encodes a serine hydroxymethyltransferase maximally expressed in root serine hydroxymethyltransferase 4 (SHM4)


Gene families : OG_01_0000425 (Gene family) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00001130.31
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT4G32520 AtSHMT3, SHM3 serine hydroxymethyltransferase 3 0.01 Gene family
AT4G37930 STM, SHM1, SHMT1 serine transhydroxymethyltransferase 1 0.03 Gene family
GSVIVT01003859001 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.04 Gene family
GSVIVT01008954001 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
GSVIVT01021046001 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
LOC_Os03g52840 Os03g0738400 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
LOC_Os05g35440 Os05g0429000 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
MA_99276g0010 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
Smo270566 PACid_15421045 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.05 Gene family
Solyc08g065490.3.1 Solyc08g065490.3 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 493 714
IPR039429 SHMT-like_dom 716 851
No external refs found!