1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g05905

Pnu_g05905 (TOM1, ATTOM1)


Aliases : TOM1, ATTOM1

Description : tobamovirus multiplication replication host factor *(TOM1) & original description: none


Gene families : OG0000961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05905
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Adi_g024422 TOM1, ATTOM1 tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Cre12.g487250 TOM1, ATTOM1 External stimuli response.biotic stress.tobamovirus... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39220.1 TOM3, LOC_Os10g39220 TOM1 tobamovirus multiplication replication host factor 0.03 OrthoFinder output from all 47 species
Sam_g27223 No alias tobamovirus multiplication replication host factor... 0.03 OrthoFinder output from all 47 species
Zm00001e032644_P002 TOM1, ATTOM1,... TOM1 tobamovirus multiplication replication host factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR009457 THH1/TOM1/TOM3_dom 18 288
No external refs found!