Gb_14301


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 154.0)


Gene families : OG_01_0000874 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000874_tree ,
OG_02_0000126 (LandPlants) Phylogenetic Tree(s): OG_02_0000126_tree ,
OG_03_0000049 (SeedPlants) Phylogenetic Tree(s): OG_03_0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14301
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Gb_01356 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_07227 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_08736 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_08813 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_13854 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_18467 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_20680 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_24463 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_27820 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_30070 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_32311 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_34670 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_35937 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_37844 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_38553 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_00282 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_01356 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 LandPlants
Gb_03166 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_03910 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_04615 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_06715 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_07227 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_08000 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_08736 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_08813 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 LandPlants
Gb_12163 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 LandPlants
Gb_13579 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_13854 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_14369 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_16624 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_18467 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_20680 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 LandPlants
Gb_21706 No alias Uncharacterized mitochondrial protein AtMg00820... 0.04 LandPlants
Gb_22530 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_22939 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_23035 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_24463 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_25980 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_26742 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_27820 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_28273 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 LandPlants
Gb_30070 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 LandPlants
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_32087 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 LandPlants
Gb_32311 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_34518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_34670 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_34818 No alias no hits & (original description: none) 0.04 LandPlants
Gb_35937 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 LandPlants
Gb_36407 No alias no hits & (original description: none) 0.04 LandPlants
Gb_37683 No alias no hits & (original description: none) 0.04 LandPlants
Gb_37844 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_38553 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_39067 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 LandPlants
Gb_00282 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_01356 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 SeedPlants
Gb_03166 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 SeedPlants
Gb_03910 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_04615 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_07227 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_08000 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_08736 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_08813 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 SeedPlants
Gb_12163 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 SeedPlants
Gb_13579 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_13854 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_14369 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_14402 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_16624 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_17834 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_18467 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_20680 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 SeedPlants
Gb_21706 No alias Uncharacterized mitochondrial protein AtMg00820... 0.04 SeedPlants
Gb_22530 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_22939 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_23035 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_24463 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_25980 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_26742 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_27820 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_28273 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 SeedPlants
Gb_30070 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 SeedPlants
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_32087 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 SeedPlants
Gb_32311 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_34518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_34670 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_34818 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_35937 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 SeedPlants
Gb_36407 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_37683 No alias no hits & (original description: none) 0.04 SeedPlants
Gb_37844 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_38553 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants
Gb_39067 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 SeedPlants

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 8 60
No external refs found!