Gb_14212


Description : RNA editing factor (POCO)


Gene families : OG_01_0000235 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000235_tree ,
OG_02_0000298 (LandPlants) Phylogenetic Tree(s): OG_02_0000298_tree ,
OG_03_0006313 (SeedPlants) Phylogenetic Tree(s): OG_03_0006313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_14212
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00194260 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g07590,... 0.06 Archaeplastida
LOC_Os04g25410.1 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 Archaeplastida
MA_170161g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
MA_9997953g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 Archaeplastida
Smo412643 No alias Pentatricopeptide repeat-containing protein At1g07590,... 0.04 Archaeplastida
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 Archaeplastida
Solyc02g078350.3.1 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.02 Archaeplastida
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.05 Archaeplastida
Zm00001e039746_P002 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 Archaeplastida
AMTR_s00085p00059480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
AT1G02370 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 LandPlants
AT1G60770 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 LandPlants
AT4G01990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 LandPlants
AT4G02820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 LandPlants
Gb_09452 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.03 LandPlants
LOC_Os04g25410.1 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
MA_128872g0020 No alias Pentatricopeptide repeat-containing protein At1g02150... 0.03 LandPlants
MA_170161g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
MA_94340g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.01 LandPlants
MA_9997953g0010 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.02 LandPlants
Solyc01g100580.3.1 No alias Pentatricopeptide repeat-containing protein At4g01990,... 0.01 LandPlants
Solyc02g078330.3.1 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 LandPlants
Solyc02g078350.3.1 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.02 LandPlants
Zm00001e012594_P001 No alias Pentatricopeptide repeat-containing protein At4g21705,... 0.05 LandPlants
Zm00001e039746_P002 No alias Pentatricopeptide repeat-containing protein At4g02820,... 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 422 448
IPR002885 Pentatricopeptide_repeat 385 410
IPR002885 Pentatricopeptide_repeat 229 287
No external refs found!