Pnu_g05650 (SPL8)

Aliases : SPL8

Description : SBP-type transcription factor & original description: none

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g05650

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00058370	SPL4,...	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Ala_g22799	SPL13, SPL13A	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08472	No alias	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10734	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s1185.g099051	No alias	not classified & original description: CDS=1-531	0.03	OrthoFinder output from all 47 species
Nbi_g23336	SPL3	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo79699	SPL13, SPL13A	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Zm00001e006686_P001	SPL8, Zm00001e006686	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Zm00001e010067_P001	AtSPL9, SPL9,...	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Zm00001e041822_P001	SPL8, Zm00001e041822	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	227	300

External Links

No external refs found!