1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g05628

Pnu_g05628


Description : not classified & original description: none


Gene families : OG0003419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003419_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05628
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Ceric.05G024600.1 Ceric.05G024600 not classified & original description: pacid=50578404... 0.03 OrthoFinder output from all 47 species
Cre12.g487200 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 284 317
IPR001680 WD40_repeat 193 230
IPR001680 WD40_repeat 328 358
IPR001680 WD40_repeat 234 273
IPR001680 WD40_repeat 113 145
IPR001680 WD40_repeat 362 402
IPR001680 WD40_repeat 68 103
No external refs found!