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  5. MA_442926g0010

MA_442926g0010


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_442926g0010
Cluster HCCA cluster: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Gene family
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
GSVIVT01000420001 No alias No description available 0.03 Gene family
GSVIVT01003256001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01009789001 No alias No description available 0.03 Gene family
GSVIVT01011333001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01011501001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01015087001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01016860001 No alias No description available 0.02 Gene family
GSVIVT01020758001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01021023001 No alias No description available 0.03 Gene family
GSVIVT01021756001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01022230001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01024493001 No alias No description available 0.03 Gene family
GSVIVT01024588001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01024870001 No alias No description available 0.03 Gene family
GSVIVT01025639001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01027504001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01027525001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01031265001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01032394001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01032994001 No alias No description available 0.03 Gene family
GSVIVT01033004001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01036511001 No alias No description available 0.03 Gene family
GSVIVT01036788001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01037562001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.02 Gene family
LOC_Os01g59890 Os01g0814300 35.2 not assigned.unknown Tetratricopeptide repeat... 0.02 Gene family
LOC_Os01g72930 Os01g0959600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os03g04390 Os03g0136700 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os03g11700 Os03g0216400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os04g39410 Os04g0469400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.02 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os05g30710 Os05g0370000 No description available 0.02 Gene family
LOC_Os05g50950 Os05g0586900 No description available 0.03 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.04 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.04 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.04 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_100519g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_10429043g0020 No alias No description available 0.04 Gene family
MA_10429540g0020 No alias No description available 0.02 Gene family
MA_106123g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_121267g0010 No alias No description available 0.03 Gene family
MA_130735g0010 No alias No description available 0.03 Gene family
MA_136326g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_14659g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_14938g0010 No alias No description available 0.04 Gene family
MA_17949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_25584g0010 No alias No description available 0.02 Gene family
MA_33151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_39263g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_445076g0010 No alias No description available 0.04 Gene family
MA_56714g0010 No alias No description available 0.04 Gene family
MA_57048g0010 No alias No description available 0.03 Gene family
MA_656915g0010 No alias No description available 0.03 Gene family
MA_7691g0010 No alias No description available 0.03 Gene family
MA_8210920g0010 No alias No description available 0.02 Gene family
MA_86894g0010 No alias No description available 0.03 Gene family
MA_90090g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Smo10002 PACid_15418807 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo334 PACid_15419253 No description available 0.02 Gene family
Smo84768 PACid_15419386 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo85415 PACid_15419909 No description available 0.02 Gene family
Smo90123 PACid_15410274 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo98955 PACid_15417483 No description available 0.02 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g007850.2.1 Solyc01g007850.2 No description available 0.02 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.04 Gene family
Solyc01g091610.1.1 Solyc01g091610.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc02g079380.2.1 Solyc02g079380.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc03g007840.1.1 Solyc03g007840.1 35.1.27 not assigned.no ontology.tetratricopeptide... 0.04 Gene family
Solyc03g025700.1.1 Solyc03g025700.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc03g082830.2.1 Solyc03g082830.2 No description available 0.05 Gene family
Solyc03g111210.3.1 Solyc03g111210.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc03g114010.2.1 Solyc03g114010.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.03 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.03 Gene family
Solyc07g053520.2.1 Solyc07g053520.2 No description available 0.04 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g008940.1.1 Solyc11g008940.1 No description available 0.03 Gene family
Solyc11g011860.1.1 Solyc11g011860.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc11g067210.1.1 Solyc11g067210.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g071370.1.1 Solyc11g071370.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc12g006575.1.1 Solyc12g006575.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.05 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.03 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d020825 GRMZM5G851929 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d023525 GRMZM2G001466 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d028388 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.02 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d029764 GRMZM2G383854 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d031535 GRMZM2G076257 No description available 0.05 Gene family
Zm00001d032185 GRMZM2G161368 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d034933 No alias No description available 0.02 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d037891 No alias No description available 0.04 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.04 Gene family
Zm00001d052794 GRMZM2G140600 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 912 1026
IPR002885 Pentatricopeptide_repeat 234 280
IPR002885 Pentatricopeptide_repeat 740 786
IPR002885 Pentatricopeptide_repeat 638 683
IPR002885 Pentatricopeptide_repeat 335 383
IPR002885 Pentatricopeptide_repeat 435 482
IPR002885 Pentatricopeptide_repeat 132 180
IPR002885 Pentatricopeptide_repeat 537 584
IPR002885 Pentatricopeptide_repeat 713 737
IPR002885 Pentatricopeptide_repeat 879 908
IPR002885 Pentatricopeptide_repeat 309 332
IPR002885 Pentatricopeptide_repeat 615 637
IPR002885 Pentatricopeptide_repeat 209 232
IPR002885 Pentatricopeptide_repeat 813 837
No external refs found!