Gb_13711


Description : Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus (sp|c6l7u1|lin1_lotja : 580.0)


Gene families : OG_01_0001418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001418_tree ,
OG_02_0001365 (LandPlants) Phylogenetic Tree(s): OG_02_0001365_tree ,
OG_03_0011468 (SeedPlants) Phylogenetic Tree(s): OG_03_0011468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13711
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00102360 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula 0.04 Archaeplastida
Mp3g09570.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 Archaeplastida
Smo418457 No alias External stimuli response.biotic... 0.08 Archaeplastida
AMTR_s00044p00102360 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula 0.04 LandPlants
Mp3g09570.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 LandPlants
AMTR_s00044p00102360 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 682 754
IPR001680 WD40_repeat 1376 1411
No external refs found!