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  5. AMTR_s00038p00175390

AMTR_s00038p00175390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.116

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00175390
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00066p00157030 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.02 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_3151g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_508g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_81581g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
Mp6g07740.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Smo77318 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.02 LandPlants
Gb_12989 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.02 LandPlants
Mp6g07740.1 No alias transcription factor (mTERF) 0.02 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.03 LandPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.02 LandPlants
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 LandPlants
Zm00001e013884_P001 No alias transcription factor (mTERF) 0.02 LandPlants
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.03 LandPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 LandPlants
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 SeedPlants
Gb_05782 No alias transcription factor (mTERF) 0.01 SeedPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 SeedPlants
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_502709g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.02 SeedPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.03 SeedPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.02 SeedPlants
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 SeedPlants
Zm00001e013884_P001 No alias transcription factor (mTERF) 0.02 SeedPlants
Zm00001e031638_P001 No alias transcription factor (mTERF) 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 38 113
IPR003690 MTERF 133 307
No external refs found!