Gb_13517


Description : Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana (sp|q8gyl7|pp361_arath : 339.0)


Gene families : OG_01_0006806 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006806_tree ,
OG_02_0007343 (LandPlants) Phylogenetic Tree(s): OG_02_0007343_tree ,
OG_03_0007467 (SeedPlants) Phylogenetic Tree(s): OG_03_0007467_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13517
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 Archaeplastida
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 Archaeplastida
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.01 LandPlants
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 LandPlants
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 LandPlants
Smo84012 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 LandPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 LandPlants
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.01 SeedPlants
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.01 SeedPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 312
IPR002885 Pentatricopeptide_repeat 472 493
IPR002885 Pentatricopeptide_repeat 196 252
IPR002885 Pentatricopeptide_repeat 314 361
No external refs found!