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  5. Gb_12979

Gb_12979


Description : transcription factor (mTERF)


Gene families : OG_01_0006862 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006862_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0003365 (SeedPlants) Phylogenetic Tree(s): OG_03_0003365_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12979
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
MA_209070g0010 No alias transcription factor (mTERF) 0.06 Archaeplastida
MA_34619g0010 No alias transcription factor (mTERF) 0.05 Archaeplastida
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 LandPlants
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.01 LandPlants
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.03 LandPlants
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 LandPlants
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 LandPlants
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.02 LandPlants
Gb_12989 No alias transcription factor (mTERF) 0.04 LandPlants
LOC_Os05g33440.1 No alias transcription factor (mTERF) 0.01 LandPlants
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.01 LandPlants
LOC_Os06g12060.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os06g12100.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os06g12110.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os11g09990.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os11g10000.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.03 LandPlants
MA_3151g0010 No alias transcription factor (mTERF) 0.03 LandPlants
MA_31885g0010 No alias transcription factor (mTERF) 0.05 LandPlants
MA_714651g0010 No alias transcription factor (mTERF) 0.08 LandPlants
Solyc02g082010.3.1 No alias transcription factor (mTERF) 0.03 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.04 LandPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.01 LandPlants
MA_209070g0010 No alias transcription factor (mTERF) 0.03 SeedPlants
MA_34619g0010 No alias transcription factor (mTERF) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 189 366
IPR003690 MTERF 101 184
No external refs found!