Gb_12824


Description : DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 112.0)


Gene families : OG_01_0003355 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003355_tree ,
OG_02_0004398 (LandPlants) Phylogenetic Tree(s): OG_02_0004398_tree ,
OG_03_0006142 (SeedPlants) Phylogenetic Tree(s): OG_03_0006142_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12824
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00101630 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.11 Archaeplastida
AT3G23890 TOPII, ATTOPII topoisomerase II 0.16 Archaeplastida
Cpa|evm.model.tig00021432.55 No alias DNA topoisomerase 2 OS=Pisum sativum 0.08 Archaeplastida
Cpa|evm.model.tig00021433.2 No alias DNA topoisomerase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre01.g009250 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.07 Archaeplastida
GSVIVT01032138001 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.17 Archaeplastida
LOC_Os02g47150.1 No alias DNA topoisomerase (TOP2) 0.07 Archaeplastida
MA_133272g0010 No alias DNA topoisomerase (TOP2) 0.18 Archaeplastida
MA_6634g0010 No alias DNA topoisomerase (TOP2) 0.19 Archaeplastida
Mp3g13420.1 No alias DNA topoisomerase (TOP2) 0.11 Archaeplastida
Pp3c18_20260V3.1 No alias topoisomerase II 0.14 Archaeplastida
Pp3c19_3610V3.1 No alias topoisomerase II 0.1 Archaeplastida
Smo127267 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.09 Archaeplastida
Smo98330 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.1 Archaeplastida
Solyc01g087500.3.1 No alias DNA topoisomerase (TOP2) 0.07 Archaeplastida
Zm00001e015542_P001 No alias DNA topoisomerase (TOP2) 0.14 Archaeplastida
Zm00001e023296_P001 No alias DNA topoisomerase (TOP2) 0.15 Archaeplastida
AMTR_s00103p00101630 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.09 LandPlants
AT3G23890 TOPII, ATTOPII topoisomerase II 0.15 LandPlants
GSVIVT01032138001 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.18 LandPlants
LOC_Os02g47150.1 No alias DNA topoisomerase (TOP2) 0.06 LandPlants
MA_133272g0010 No alias DNA topoisomerase (TOP2) 0.16 LandPlants
MA_6634g0010 No alias DNA topoisomerase (TOP2) 0.17 LandPlants
Mp3g13420.1 No alias DNA topoisomerase (TOP2) 0.11 LandPlants
Pp3c18_20260V3.1 No alias topoisomerase II 0.11 LandPlants
Pp3c19_3610V3.1 No alias topoisomerase II 0.1 LandPlants
Smo127267 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.1 LandPlants
Smo98330 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.1 LandPlants
Solyc01g087500.3.1 No alias DNA topoisomerase (TOP2) 0.07 LandPlants
Zm00001e015542_P001 No alias DNA topoisomerase (TOP2) 0.15 LandPlants
Zm00001e023296_P001 No alias DNA topoisomerase (TOP2) 0.16 LandPlants
AMTR_s00103p00101630 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.09 SeedPlants
AT3G23890 TOPII, ATTOPII topoisomerase II 0.14 SeedPlants
GSVIVT01032138001 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.18 SeedPlants
LOC_Os02g47150.1 No alias DNA topoisomerase (TOP2) 0.05 SeedPlants
MA_133272g0010 No alias DNA topoisomerase (TOP2) 0.13 SeedPlants
MA_6634g0010 No alias DNA topoisomerase (TOP2) 0.14 SeedPlants
Solyc01g087500.3.1 No alias DNA topoisomerase (TOP2) 0.07 SeedPlants
Zm00001e015542_P001 No alias DNA topoisomerase (TOP2) 0.13 SeedPlants
Zm00001e023296_P001 No alias DNA topoisomerase (TOP2) 0.14 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002205 Topo_IIA_A/C 14 168
No external refs found!