AMTR_s00038p00079560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.35

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG_01_0000353 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000353_tree ,
OG_02_0000237 (LandPlants) Phylogenetic Tree(s): OG_02_0000237_tree ,
OG_03_0007716 (SeedPlants) Phylogenetic Tree(s): OG_03_0007716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00079560
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 Archaeplastida
GSVIVT01031663001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Gb_23207 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Gb_37787 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os01g69070.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os05g50140.2 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os06g44970.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os11g02950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_10433084g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Mp5g05150.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.04 Archaeplastida
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e023910_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e036414_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
AMTR_s00038p00074690 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 LandPlants
AT1G77110 PIN6 Auxin efflux carrier family protein 0.02 LandPlants
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 LandPlants
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Gb_37787 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 LandPlants
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 LandPlants
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 LandPlants
LOC_Os01g69070.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
LOC_Os05g50140.2 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
LOC_Os06g44970.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
MA_10433084g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.01 LandPlants
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
AMTR_s00038p00074690 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004776 Mem_trans 7 370
No external refs found!