Gb_12581


Description : transcription factor (MADS/AGL)


Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0000008 (LandPlants) Phylogenetic Tree(s): OG_02_0000008_tree ,
OG_03_0000013 (SeedPlants) Phylogenetic Tree(s): OG_03_0000013_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12581
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT1G22130 AGL104 AGAMOUS-like 104 0.01 Archaeplastida
AT1G77980 AGL66 AGAMOUS-like 66 0.01 Archaeplastida
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.01 Archaeplastida
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.01 Archaeplastida
Cpa|evm.model.tig00000944.9 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01012110001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01025945001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01026207001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
Gb_03068 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
LOC_Os06g11970.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
LOC_Os08g38590.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc05g051825.1.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc06g064840.4.1 No alias no description available(sp|f6i457|ag11c_vitvi : 172.0) 0.02 Archaeplastida
Zm00001e036127_P002 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
AT1G22130 AGL104 AGAMOUS-like 104 0.01 LandPlants
AT1G77980 AGL66 AGAMOUS-like 66 0.01 LandPlants
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.01 LandPlants
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.01 LandPlants
GSVIVT01012110001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01025945001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
GSVIVT01026207001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
Gb_03068 No alias transcription factor (MADS/AGL) 0.01 LandPlants
LOC_Os06g11970.1 No alias transcription factor (MADS/AGL) 0.01 LandPlants
LOC_Os08g38590.1 No alias transcription factor (MADS/AGL) 0.01 LandPlants
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc05g051825.1.1 No alias transcription factor (MADS/AGL) 0.04 LandPlants
Solyc06g064840.4.1 No alias no description available(sp|f6i457|ag11c_vitvi : 172.0) 0.02 LandPlants
Zm00001e036127_P002 No alias transcription factor (MADS/AGL) 0.02 LandPlants
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!