Gb_12368


Description : transcription factor (mTERF)


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12368
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.06 Archaeplastida
AMTR_s00010p00235420 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.05 Archaeplastida
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
GSVIVT01017772001 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.05 Archaeplastida
Gb_24665 No alias transcription factor (mTERF) 0.06 Archaeplastida
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os06g12100.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_122549g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_3151g0010 No alias transcription factor (mTERF) 0.05 Archaeplastida
MA_31885g0010 No alias transcription factor (mTERF) 0.07 Archaeplastida
MA_714651g0010 No alias transcription factor (mTERF) 0.05 Archaeplastida
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e031638_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.06 LandPlants
AMTR_s00010p00235420 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 LandPlants
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 LandPlants
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 LandPlants
GSVIVT01017772001 No alias RNA biosynthesis.organelle... 0.02 LandPlants
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 LandPlants
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.04 LandPlants
LOC_Os06g12100.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.02 LandPlants
MA_3151g0010 No alias transcription factor (mTERF) 0.05 LandPlants
MA_31885g0010 No alias transcription factor (mTERF) 0.03 LandPlants
MA_714651g0010 No alias transcription factor (mTERF) 0.05 LandPlants
Smo408106 No alias RNA biosynthesis.organelle... 0.03 LandPlants
Solyc02g067960.3.1 No alias transcription factor (mTERF) 0.03 LandPlants
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.04 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.03 LandPlants
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
AMTR_s00010p00235420 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.03 SeedPlants
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 SeedPlants
GSVIVT01017772001 No alias RNA biosynthesis.organelle... 0.02 SeedPlants
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.03 SeedPlants
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 SeedPlants
LOC_Os06g12100.1 No alias transcription factor (mTERF) 0.03 SeedPlants
LOC_Os11g10000.1 No alias transcription factor (mTERF) 0.01 SeedPlants
MA_192398g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_3151g0010 No alias transcription factor (mTERF) 0.03 SeedPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003690 MTERF 56 160
IPR003690 MTERF 138 329
No external refs found!