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  5. Pnu_g03839

Pnu_g03839


Description : integrin-like protein *(AT14a) & original description: none


Gene families : OG0002926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002926_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g03839

Target Alias Description ECC score Gene Family Method Actions
Ceric.17G036900.1 Ceric.17G036900 integrin-like protein *(AT14a) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01031916001 No alias UPF0496 protein At4g34320 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os10g21540.1 LOC_Os10g21540 integrin-like protein (AT14a) 0.02 OrthoFinder output from all 47 species
Solyc11g039740.3.1 Solyc11g039740 integrin-like protein (AT14a) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR007749 DUF677 32 360
No external refs found!