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  5. AMTR_s00037p00235150

AMTR_s00037p00235150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.155

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5-like chromatin remodeling factor


Gene families : OG_01_0002595 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002595_tree ,
OG_02_0002772 (LandPlants) Phylogenetic Tree(s): OG_02_0002772_tree ,
OG_03_0002454 (SeedPlants) Phylogenetic Tree(s): OG_03_0002454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00037p00235150
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g32730.1 No alias chromatin remodeling factor (Rad5-like) 0.03 Archaeplastida
LOC_Os07g32730.1 No alias chromatin remodeling factor (Rad5-like) 0.03 LandPlants
LOC_Os07g32730.1 No alias chromatin remodeling factor (Rad5-like) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 801 877
IPR000330 SNF2_dom 202 328
IPR000330 SNF2_dom 443 658
No external refs found!