AMTR_s00037p00233460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.150

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component


Gene families : OG_01_0003910 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003910_tree ,
OG_02_0005226 (LandPlants) Phylogenetic Tree(s): OG_02_0005226_tree ,
OG_03_0006494 (SeedPlants) Phylogenetic Tree(s): OG_03_0006494_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00037p00233460
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g01290.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Mp6g05770.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Solyc02g089070.3.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Zm00001e025912_P001 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
AT3G02200 No alias Proteasome component (PCI) domain protein 0.03 LandPlants
LOC_Os04g01290.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.05 LandPlants
MA_10427723g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.02 LandPlants
MA_10436971g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.02 LandPlants
Mp6g05770.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 LandPlants
Pp3c14_18640V3.1 No alias Proteasome component (PCI) domain protein 0.02 LandPlants
Solyc02g089070.3.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 LandPlants
Zm00001e025912_P001 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.03 LandPlants
AT3G02200 No alias Proteasome component (PCI) domain protein 0.03 SeedPlants
LOC_Os04g01290.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.05 SeedPlants
MA_10427723g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.02 SeedPlants
MA_10436971g0010 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.02 SeedPlants
Solyc02g089070.3.1 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.04 SeedPlants
Zm00001e025912_P001 No alias component eIF3m of eIF3 mRNA-to-PIC binding complex 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000717 PCI_dom 260 359
No external refs found!