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  5. Pnu_g03722

Pnu_g03722


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g03722
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g18332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34731.t1 Aspi01Gene34731 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0236.g059498 No alias not classified & original description: CDS=1-2331 0.05 OrthoFinder output from all 47 species
Azfi_s0408.g068452 No alias not classified & original description: CDS=1-3063 0.04 OrthoFinder output from all 47 species
Cba_g67793 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g29241 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_01592 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g04685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g21358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g06420 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09944 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29710 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006578 No alias not classified & original description: CDS=156-2555 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019330 No alias not classified & original description: CDS=1-2295 0.04 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo118770 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.06 OrthoFinder output from all 47 species
Smo131810 CRR22 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Solyc01g100340.4.1 Solyc01g100340 Pentatricopeptide repeat-containing protein At1g09190... 0.03 OrthoFinder output from all 47 species
Spa_g32588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 199
IPR002885 Pentatricopeptide_repeat 97 145
IPR002885 Pentatricopeptide_repeat 8 44
IPR002885 Pentatricopeptide_repeat 63 94
No external refs found!