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  5. MA_3891g0010

MA_3891g0010


Description : 27.3.29 RNA.regulation of transcription.TCP transcription factor family a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation. plastid transcription factor 1 (PTF1)


Gene families : OG_01_0000154 (Gene family) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_3891g0010
Cluster HCCA cluster: Cluster_392

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g55750 Os01g0763200 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
MA_35349g0010 No alias 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
Zm00001d005737 GRMZM2G110242 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
Zm00001d007868 GRMZM2G020805 27.3.29 RNA.regulation of transcription.TCP... 0.03 Gene family
Zm00001d013119 GRMZM2G089361 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
Zm00001d018806 No alias 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
Zm00001d020433 GRMZM2G064628 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family
Zm00001d025250 GRMZM2G458087 No description available 0.02 Gene family
Zm00001d050389 GRMZM2G060319 27.3.29 RNA.regulation of transcription.TCP... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 102 277
No external refs found!