AMTR_s00037p00169980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.81

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0000515 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000515_tree ,
OG_02_0000563 (LandPlants) Phylogenetic Tree(s): OG_02_0000563_tree ,
OG_03_0000492 (SeedPlants) Phylogenetic Tree(s): OG_03_0000492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00037p00169980
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g58210.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 Archaeplastida
MA_132844g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 Archaeplastida
MA_491986g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 Archaeplastida
Solyc04g049140.4.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 Archaeplastida
AT4G21430 B160 Zinc finger, RING-type;Transcription factor... 0.03 LandPlants
LOC_Os02g58210.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 LandPlants
MA_132844g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 LandPlants
MA_491986g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.05 LandPlants
MA_491986g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003347 JmjC_dom 1075 1173
No external refs found!