AMTR_s00037p00146990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.64

Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG8 ubiquitin-fold protein


Gene families : OG_01_0000927 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000927_tree ,
OG_02_0001268 (LandPlants) Phylogenetic Tree(s): OG_02_0001268_tree ,
OG_03_0001955 (SeedPlants) Phylogenetic Tree(s): OG_03_0001955_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00037p00146990
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Gb_08297 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida
Gb_21524 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida
Pp3c17_5780V3.1 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Smo109593 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.01 Archaeplastida
Solyc10g006270.4.1 No alias No annotation 0.02 Archaeplastida
GSVIVT01001307001 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 LandPlants
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 LandPlants
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 LandPlants
Pp3c17_5780V3.1 No alias Ubiquitin-like superfamily protein 0.03 LandPlants
Smo166976 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.01 LandPlants
Zm00001e021618_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.01 LandPlants
GSVIVT01001307001 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!