Gb_10677


Description : component HAF/TAF1 of SAGA transcription co-activator complex. component HAF/TAF1 of TFIId basal transcription regulation complex. protein kinase (TAF)


Gene families : OG_01_0002996 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002996_tree ,
OG_02_0003348 (LandPlants) Phylogenetic Tree(s): OG_02_0003348_tree ,
OG_03_0005183 (SeedPlants) Phylogenetic Tree(s): OG_03_0005183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10677
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.07 Archaeplastida
Cpa|evm.model.tig00020903.20 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
Cre10.g425501 No alias Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.04 Archaeplastida
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.04 Archaeplastida
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.06 Archaeplastida
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.05 Archaeplastida
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.06 LandPlants
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.02 LandPlants
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.03 LandPlants
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.06 LandPlants
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.05 LandPlants
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.02 LandPlants
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.05 SeedPlants
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.02 SeedPlants
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 1822 1898
IPR022591 TFIID_sub1_DUF3591 591 1161
IPR009067 TAF_II_230-bd 20 65
IPR041670 Znf-CCHC_6 1421 1442
IPR000626 Ubiquitin-like_dom 676 746
No external refs found!