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  5. Pnu_g02102

Pnu_g02102 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g02102
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00165180 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Adi_g058538 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058539 KNAT6, KNAT6L, KNAT6S KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060986 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085792 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107007 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05964 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21136 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15588 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49427.t2 KNAT3, Aspi01Gene49427 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20746 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09080 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01030488001 BUM1, SHL, STM,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
GSVIVT01031241001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os03g47022.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g51690.2 BP, BP1, KNAT1,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03884.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os08g19650.1 KNAT3, LOC_Os08g19650 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Msp_g30454 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16534 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16987 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19225 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25139 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25529 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36039 KNAT4 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45770 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.04 OrthoFinder output from all 47 species
Sam_g27266 No alias KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36645 No alias KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40671 No alias KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo159366 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc01g100510.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Solyc02g081120.4.1 BUM1, SHL, STM,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Tin_g12897 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005825_P002 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Zm00001e017489_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e025100_P003 KNAT3, Zm00001e025100 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e029453_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
InterPro domains Description Start Stop
IPR005540 KNOX1 224 264
IPR005541 KNOX2 285 333
No external refs found!