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  5. AMTR_s00036p00235910

AMTR_s00036p00235910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.181

No description available


Gene families : OG_01_0001895 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001895_tree ,
OG_02_0001910 (LandPlants) Phylogenetic Tree(s): OG_02_0001910_tree ,
OG_03_0001734 (SeedPlants) Phylogenetic Tree(s): OG_03_0001734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00235910
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT1G33680 No alias KH domain-containing protein 0.03 Archaeplastida
AT2G25970 No alias KH domain-containing protein 0.04 Archaeplastida
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre06.g250800 No alias No description available 0.03 Archaeplastida
GSVIVT01035354001 No alias No description available 0.02 Archaeplastida
GSVIVT01036378001 No alias No description available 0.05 Archaeplastida
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10434164g0020 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_13061g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_17830V3.1 No alias KH domain-containing protein 0.02 Archaeplastida
Pp3c7_11410V3.1 No alias KH domain-containing protein 0.04 Archaeplastida
Smo437890 No alias Protein BTR1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc11g040370.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc12g095960.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014452_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e024927_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029163_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
AT1G33680 No alias KH domain-containing protein 0.03 LandPlants
AT2G25970 No alias KH domain-containing protein 0.04 LandPlants
GSVIVT01035354001 No alias No description available 0.02 LandPlants
GSVIVT01036378001 No alias No description available 0.04 LandPlants
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.05 LandPlants
MA_10434164g0020 No alias no hits & (original description: none) 0.06 LandPlants
MA_13061g0010 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c11_17830V3.1 No alias KH domain-containing protein 0.02 LandPlants
Pp3c7_11410V3.1 No alias KH domain-containing protein 0.03 LandPlants
Smo437890 No alias Protein BTR1 OS=Arabidopsis thaliana 0.02 LandPlants
Solyc11g040370.2.1 No alias no hits & (original description: none) 0.08 LandPlants
Solyc12g095960.3.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e014452_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e024927_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e029163_P001 No alias no hits & (original description: none) 0.05 LandPlants
AT1G33680 No alias KH domain-containing protein 0.02 SeedPlants
AT2G25970 No alias KH domain-containing protein 0.03 SeedPlants
GSVIVT01035354001 No alias No description available 0.02 SeedPlants
GSVIVT01036378001 No alias No description available 0.04 SeedPlants
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.05 SeedPlants
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.01 SeedPlants
MA_10434164g0020 No alias no hits & (original description: none) 0.06 SeedPlants
MA_13061g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc11g040370.2.1 No alias no hits & (original description: none) 0.07 SeedPlants
Solyc12g095960.3.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e014452_P001 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e021868_P005 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e024927_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e029163_P001 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 134 198
IPR004088 KH_dom_type_1 228 292
No external refs found!