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  5. Pnu_g01718

Pnu_g01718


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01718

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244260 evm_27.TU.AmTr_v1... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Compare specificitiesAla_g02183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g52355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029202001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27548 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g19260.1 AATP1, LOC_Os01g19260 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g27340.1 LOC_Os09g27340 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435321g0020 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g11172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096230.4.1 Solyc01g096230 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013139_P001 Zm00001e013139 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032588_P001 BCS1, Zm00001e032588 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 245 385
IPR025753 AAA_N_dom 30 122
No external refs found!