MA_354248g0010


Description : 10.8.1 cell wall.pectin*esterases.PME Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_01_0000075 (Gene family) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_354248g0010
Cluster HCCA cluster: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.03 Gene family
AT3G59010 PME61 pectin methylesterase 61 0.02 Gene family
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Gene family
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
GSVIVT01017687001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.03 Gene family
GSVIVT01018622001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
GSVIVT01027652001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
GSVIVT01028265001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
GSVIVT01037348001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
GSVIVT01038546001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
MA_648837g0010 No alias 10.8.1 cell wall.pectin*esterases.PME pectin... 0.03 Gene family
Solyc01g091050.3.1 Solyc01g091050.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
Solyc03g083870.3.1 Solyc03g083870.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 85 246
IPR000070 Pectinesterase_cat 335 632
No external refs found!