Pnu_g01573 (AtRABG3d, RABG3d)

Aliases : AtRABG3d, RABG3d

Description : G-class RAB GTPase & original description: none

Gene families : OG0000908 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000908_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g01573
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Adi_g052881	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 39 species
Aspi01Gene25454.t1	AtRABG3d,...	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 39 species
Dac_g05640	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 39 species
Ehy_g22086	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 39 species
Lfl_g25393	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 39 species
Sam_g48536	No alias	G-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
BP	GO:0032981	mitochondrial respiratory chain complex I assembly	IEP	HCCA
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	177

External Links

No external refs found!