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  5. Pnu_g01424

Pnu_g01424


Description : GASA precursor polypeptide & original description: none


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01424
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00261380 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AT2G18420 No alias Gibberellin-regulated family protein 0.02 OrthoFinder output from all 47 species
AT5G15230 GASA4 GAST1 protein homolog 4 0.03 OrthoFinder output from all 47 species
Ala_g34519 GASA1 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12349.t1 Aspi01Gene12349 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70040.t1 GASA5, Aspi01Gene70040 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g02048 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22315 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27816 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28012 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033563001 No alias Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
LOC_Os04g39110.1 LOC_Os04g39110 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
LOC_Os05g31280.1 LOC_Os05g31280 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
LOC_Os06g15620.1 LOC_Os06g15620 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Len_g46952 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31543 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_717315g0010 GASA2 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Ore_g27903 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012542 GASA5 GASA precursor polypeptide & original description: CDS=438-746 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015335 No alias GASA precursor polypeptide & original description: CDS=1460-1924 0.02 OrthoFinder output from all 47 species
Solyc01g107370.3.1 Solyc01g107370 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc03g113910.3.1 Solyc03g113910 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc06g007920.3.1 Solyc06g007920 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Zm00001e004992_P001 Zm00001e004992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e042254_P001 Zm00001e042254 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 64 123
No external refs found!