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  5. Pnu_g01203

Pnu_g01203 (HDA2)


Aliases : HDA2

Description : class-III histone deacetylase & original description: none


Gene families : OG0005665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01203
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Dcu_g40464 HDA2 class-III histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035364001 HDA2 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Pir_g09345 HDA2 class-III histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29157 HDA2 class-III histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19549 No alias class-III histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28395 HDA2 class-III histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 65 346
No external refs found!