Gb_09464


Description : Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana (sp|q8s9d1|pp395_arath : 462.0)


Gene families : OG_01_0016286 (Archaeplastida) Phylogenetic Tree(s): OG_01_0016286_tree ,
OG_02_0007114 (LandPlants) Phylogenetic Tree(s): OG_02_0007114_tree ,
OG_03_0006861 (SeedPlants) Phylogenetic Tree(s): OG_03_0006861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09464
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
MA_170169g0010 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.03 Archaeplastida
Mp7g12900.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.07 Archaeplastida
Pp3c16_9240V3.1 No alias protein kinase family protein 0.04 Archaeplastida
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.06 LandPlants
AT5G21222 No alias protein kinase family protein 0.03 LandPlants
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 LandPlants
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.02 LandPlants
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 LandPlants
Pp3c16_9240V3.1 No alias protein kinase family protein 0.03 LandPlants
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.06 LandPlants
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.06 LandPlants
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.06 LandPlants
Zm00001e034408_P002 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.04 LandPlants
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.05 SeedPlants
AT5G21222 No alias protein kinase family protein 0.03 SeedPlants
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
GSVIVT01015378001 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 SeedPlants
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.02 SeedPlants
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 SeedPlants
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.04 SeedPlants
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.05 SeedPlants
Zm00001e034408_P002 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 393 424
IPR002885 Pentatricopeptide_repeat 325 373
IPR002885 Pentatricopeptide_repeat 565 612
IPR002885 Pentatricopeptide_repeat 254 301
IPR002885 Pentatricopeptide_repeat 495 544
No external refs found!