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  5. Gb_09147

Gb_09147


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 630.0)


Gene families : OG_01_0009772 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009772_tree ,
OG_02_0010563 (LandPlants) Phylogenetic Tree(s): OG_02_0010563_tree ,
OG_03_0010228 (SeedPlants) Phylogenetic Tree(s): OG_03_0010228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09147
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AT1G64310 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Zm00001e001200_P001 No alias Pentatricopeptide repeat-containing protein At5g59600... 0.03 Archaeplastida
AT1G64310 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
MA_745151g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 LandPlants
Zm00001e020753_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 LandPlants
AMTR_s00146p00058250 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants
AT1G64310 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 SeedPlants
MA_745151g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 SeedPlants
Solyc03g112420.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants
Zm00001e020753_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 596 720
IPR002885 Pentatricopeptide_repeat 388 420
IPR002885 Pentatricopeptide_repeat 498 521
IPR002885 Pentatricopeptide_repeat 120 167
IPR002885 Pentatricopeptide_repeat 422 470
IPR002885 Pentatricopeptide_repeat 221 268
IPR002885 Pentatricopeptide_repeat 322 369
No external refs found!