Gb_09057


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 155.0)


Gene families : OG_01_0001961 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001961_tree ,
OG_02_0001392 (LandPlants) Phylogenetic Tree(s): OG_02_0001392_tree ,
OG_03_0002022 (SeedPlants) Phylogenetic Tree(s): OG_03_0002022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09057
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Gb_00459 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.24 Archaeplastida
Gb_23778 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_39569 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Pp3c4_14730V3.1 No alias No annotation 0.02 Archaeplastida
Gb_00459 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.27 LandPlants
Gb_23778 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 LandPlants
Gb_39569 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_00459 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.28 SeedPlants
Gb_23778 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.12 SeedPlants
Gb_39569 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_40023 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 142 209
No external refs found!