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  5. Gb_08834

Gb_08834


Description : Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana (sp|q9ste1|pp333_arath : 568.0)


Gene families : OG_01_0012934 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012934_tree ,
OG_02_0012888 (LandPlants) Phylogenetic Tree(s): OG_02_0012888_tree ,
OG_03_0012915 (SeedPlants) Phylogenetic Tree(s): OG_03_0012915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08834
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00030400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.03 Archaeplastida
AMTR_s00177p00030400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.03 SeedPlants
LOC_Os01g25530.1 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 334 381
IPR002885 Pentatricopeptide_repeat 234 280
IPR002885 Pentatricopeptide_repeat 636 684
IPR002885 Pentatricopeptide_repeat 132 179
IPR002885 Pentatricopeptide_repeat 435 483
IPR002885 Pentatricopeptide_repeat 535 582
IPR002885 Pentatricopeptide_repeat 712 735
IPR002885 Pentatricopeptide_repeat 208 233
No external refs found!