MA_3179g0020


Description : 33.3 development.squamosa promoter binding like (SPL) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation. squamosa promoter binding protein-like 8 (SPL8)


Gene families : OG_01_0000107 (Gene family) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_3179g0020
Cluster HCCA cluster: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008556001 No alias No description available 0.04 Gene family
GSVIVT01010496001 No alias No description available 0.02 Gene family
GSVIVT01012247001 No alias No description available 0.02 Gene family
GSVIVT01018205001 No alias No description available 0.02 Gene family
GSVIVT01020578001 No alias 33.3 development.squamosa promoter binding like (SPL)... 0.03 Gene family
LOC_Os02g08070 Os02g0177300 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
LOC_Os04g46580 Os04g0551500 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
LOC_Os06g44860 Os06g0659100 33.3 development.squamosa promoter binding like (SPL)... 0.01 Gene family
LOC_Os07g32170 Os07g0505200 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
LOC_Os09g31438 Os09g0491532 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family
MA_10429891g0010 No alias No description available 0.02 Gene family
Smo79699 PACid_15403720 No description available 0.02 Gene family
Solyc10g078700.2.1 Solyc10g078700.2 33.3 development.squamosa promoter binding like (SPL)... 0.04 Gene family
Zm00001d021056 GRMZM5G806833 No description available 0.02 Gene family
Zm00001d026175 GRMZM2G148467 33.3 development.squamosa promoter binding like (SPL)... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004333 SBP_dom 273 346
No external refs found!