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  5. Lfl_g41096

Lfl_g41096 (ATSYP52, SYP52)


Aliases : ATSYP52, SYP52

Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g41096

Target Alias Description ECC score Gene Family Method Actions
AT1G79590 ATSYP52, SYP52 syntaxin of plants 52 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065240 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.32G008200.1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dde_g01195 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dde_g01201 ATSYP51, SYP51 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014963 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Sam_g38723 No alias Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Spa_g30439 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 224 275
No external refs found!